Carnation DB

Dca38896.1

Annotation

5-exons
f-1
sp|A9PFD6_POPTR#Putative uncharacterized protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0000166#1F0P0C
AT3G46780.1 | Symbols: PTAC16 | plastid transcriptionally active 16 | chr3:17228766-17231021 FORWARD LENGTH=510
Repeat List (scaffold419)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38896.1	1	501	502	63.14	501	61	6e-153
Target_name	Start	End	Length	Cov(%)
sp\|A9PFD6_POPTR	1	512	513	99.8

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38896.1	6	501	502	56.57	496	56	2e-141
Target_name	Start	End	Length	Cov(%)
AT3G46780.1	4	509	510	99.21

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold419	Augus-PASA	mRNA	137879	140901	.	-	.	ID=Dca38896.1;Parent=Dca38896
scaffold419	Augus-PASA	exon	137879	138419	.	-	.	ID=Dca38896.1.exon1;Parent=Dca38896.1
scaffold419	Augus-PASA	exon	138658	138716	.	-	.	ID=Dca38896.1.exon2;Parent=Dca38896.1
scaffold419	Augus-PASA	exon	139450	139518	.	-	.	ID=Dca38896.1.exon3;Parent=Dca38896.1
scaffold419	Augus-PASA	exon	139647	140099	.	-	.	ID=Dca38896.1.exon4;Parent=Dca38896.1
scaffold419	Augus-PASA	exon	140515	140901	.	-	.	ID=Dca38896.1.exon5;Parent=Dca38896.1