Carnation DB

Dca3890.1

Annotation

7-exons
f-21
sp|B9HK59_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_655662#GO:0003735;GO:0006412#1F1P0C
Repeat List (scaffold114)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3890.1	7	248	249	79.51	242	82	2e-116
Target_name	Start	End	Length	Cov(%)
sp\|B9HK59_POPTR	1	242	243	99.58

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3890.1	10	248	249	78.31	239	82	4e-114
Target_name	Start	End	Length	Cov(%)
AT2G01250.1	3	241	242	98.76

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold114	Augustus	mRNA	155743	158035	.	-	.	ID=Dca3890.1;Parent=Dca3890
scaffold114	Augustus	exon	155743	155958	.	-	.	ID=Dca3890.1.exon1;Parent=Dca3890.1
scaffold114	Augustus	exon	156492	156594	.	-	.	ID=Dca3890.1.exon2;Parent=Dca3890.1
scaffold114	Augustus	exon	156680	156759	.	-	.	ID=Dca3890.1.exon3;Parent=Dca3890.1
scaffold114	Augustus	exon	156971	157028	.	-	.	ID=Dca3890.1.exon4;Parent=Dca3890.1
scaffold114	Augustus	exon	157137	157234	.	-	.	ID=Dca3890.1.exon5;Parent=Dca3890.1
scaffold114	Augustus	exon	157351	157529	.	-	.	ID=Dca3890.1.exon6;Parent=Dca3890.1
scaffold114	Augustus	exon	158018	158035	.	-	.	ID=Dca3890.1.exon7;Parent=Dca3890.1