Carnation DB

Dca3894.1

Annotation

6-exons
f-1
sp|B9SPP1_RICCO#Jun activation domain binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0204710#unknown#0F0P0C
Repeat List (scaffold114)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3894.1	1	370	371	85.98	370	86	0
Target_name	Start	End	Length	Cov(%)
sp\|B9SPP1_RICCO	1	366	367	99.72

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3894.1	7	371	371	80.32	365	81	4e-169
Target_name	Start	End	Length	Cov(%)
Os04t0654700-02	3	360	361	99.16

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold114	Augus-PASA	mRNA	186451	190086	.	-	.	ID=Dca3894.1;Parent=Dca3894
scaffold114	Augus-PASA	exon	186451	186537	.	-	.	ID=Dca3894.1.exon1;Parent=Dca3894.1
scaffold114	Augus-PASA	exon	187381	187458	.	-	.	ID=Dca3894.1.exon2;Parent=Dca3894.1
scaffold114	Augus-PASA	exon	188170	188252	.	-	.	ID=Dca3894.1.exon3;Parent=Dca3894.1
scaffold114	Augus-PASA	exon	188452	188599	.	-	.	ID=Dca3894.1.exon4;Parent=Dca3894.1
scaffold114	Augus-PASA	exon	188684	188965	.	-	.	ID=Dca3894.1.exon5;Parent=Dca3894.1
scaffold114	Augus-PASA	exon	189649	190086	.	-	.	ID=Dca3894.1.exon6;Parent=Dca3894.1