Dca3898.1
Annotation
- 2-exons
- f-1
- sp|B9HBD6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1080582#unknown#0F0P0C
- AT1G62440.1 | Symbols: LRX2 | leucine-rich repeat/extensin 2 | chr1:23111818-23115293 FORWARD LENGTH=826
- Repeat List (scaffold114)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3898.1 |
96 |
191 |
350 |
9.14 |
96 |
34 |
1e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HBD6_POPTR |
236 |
331 |
525 |
18.28 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3898.1 |
100 |
192 |
350 |
8.28 |
93 |
32 |
6e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G62440.1 |
284 |
376 |
826 |
11.25 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold114 |
Augustus |
mRNA |
228261 |
229398 |
. |
- |
. |
ID=Dca3898.1;Parent=Dca3898 |
| scaffold114 |
Augustus |
exon |
228261 |
228400 |
. |
- |
. |
ID=Dca3898.1.exon1;Parent=Dca3898.1 |
| scaffold114 |
Augustus |
exon |
228486 |
229398 |
. |
- |
. |
ID=Dca3898.1.exon2;Parent=Dca3898.1 |
