Carnation DB

Dca38992.1

Annotation

8-exons
f-1
sp|E0CSL3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_19s0014g02840#GO:0005737;GO:0008690;GO:0009103#1F1P1C
sp|B9RU62_RICCO#Cmp-2-keto-3-deoctulosonate (Cmp-kdo) cytidyltransferase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1632840#GO:0005737;GO:0008690;GO:0009103#1F1P1C
Repeat List (scaffold42)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38992.1	5	296	296	82.77	292	84	6e-138
Target_name	Start	End	Length	Cov(%)
sp\|E0CSL3_VITVI	4	297	297	98.98

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38992.1	18	296	296	75	279	80	7e-133
Target_name	Start	End	Length	Cov(%)
AT1G53000.1	12	290	290	96.2

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold42	Augustus	mRNA	310270	313541	.	-	.	ID=Dca38992.1;Parent=Dca38992
scaffold42	Augustus	exon	310270	310362	.	-	.	ID=Dca38992.1.exon1;Parent=Dca38992.1
scaffold42	Augustus	exon	310705	310815	.	-	.	ID=Dca38992.1.exon2;Parent=Dca38992.1
scaffold42	Augustus	exon	310903	310954	.	-	.	ID=Dca38992.1.exon3;Parent=Dca38992.1
scaffold42	Augustus	exon	311060	311199	.	-	.	ID=Dca38992.1.exon4;Parent=Dca38992.1
scaffold42	Augustus	exon	311457	311581	.	-	.	ID=Dca38992.1.exon5;Parent=Dca38992.1
scaffold42	Augustus	exon	311697	311783	.	-	.	ID=Dca38992.1.exon6;Parent=Dca38992.1
scaffold42	Augustus	exon	312586	312631	.	-	.	ID=Dca38992.1.exon7;Parent=Dca38992.1
scaffold42	Augustus	exon	313305	313541	.	-	.	ID=Dca38992.1.exon8;Parent=Dca38992.1