Dca39008.1
Annotation
- 4-exons
- f-1
- sp|B9HVV3_POPTR#Cationic amino acid transporter#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=PtrCAT10#GO:0016021;GO:0015171#1F0P1C
- Repeat List (scaffold420)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39008.1 |
13 |
398 |
398 |
76.63 |
386 |
77 |
4e-176
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HVV3_POPTR |
13 |
413 |
600 |
66.83 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39008.1 |
6 |
398 |
398 |
73.11 |
393 |
75 |
8e-167
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G10600.1 |
11 |
403 |
584 |
67.29 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold420 |
Augustus |
mRNA |
52274 |
57697 |
. |
- |
. |
ID=Dca39008.1;Parent=Dca39008 |
| scaffold420 |
Augustus |
exon |
52274 |
52516 |
. |
- |
. |
ID=Dca39008.1.exon1;Parent=Dca39008.1 |
| scaffold420 |
Augustus |
exon |
55275 |
55623 |
. |
- |
. |
ID=Dca39008.1.exon2;Parent=Dca39008.1 |
| scaffold420 |
Augustus |
exon |
56282 |
56501 |
. |
- |
. |
ID=Dca39008.1.exon3;Parent=Dca39008.1 |
| scaffold420 |
Augustus |
exon |
57313 |
57697 |
. |
- |
. |
ID=Dca39008.1.exon4;Parent=Dca39008.1 |
