Dca39122.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold4219)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39122.1 |
134 |
388 |
388 |
40.97 |
255 |
63 |
9e-96
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
54 |
308 |
964 |
26.45 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39122.1 |
159 |
388 |
388 |
24.48 |
230 |
41 |
7e-47
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
490 |
723 |
1428 |
16.38 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4219 |
Augustus |
mRNA |
15770 |
17170 |
. |
+ |
. |
ID=Dca39122.1;Parent=Dca39122 |
| scaffold4219 |
Augustus |
exon |
15770 |
16160 |
. |
+ |
. |
ID=Dca39122.1.exon1;Parent=Dca39122.1 |
| scaffold4219 |
Augustus |
exon |
16395 |
17170 |
. |
+ |
. |
ID=Dca39122.1.exon2;Parent=Dca39122.1 |
