Dca39135.1
Annotation
- 3-exons
- f-700
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Os09t0122300-01 Similar to Zinc knuckle family protein.
- Repeat List (scaffold4220)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39135.1 |
61 |
217 |
217 |
35.02 |
157 |
49 |
2e-39
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
11 |
164 |
1717 |
8.96 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39135.1 |
340 |
455 |
654 |
5.96 |
116 |
33 |
1e-10
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
70 |
189 |
192 |
62.5 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4220 |
Augustus |
mRNA |
15100 |
17913 |
. |
+ |
. |
ID=Dca39135.1;Parent=Dca39135 |
| scaffold4220 |
Augustus |
exon |
15100 |
15752 |
. |
+ |
. |
ID=Dca39135.1.exon1;Parent=Dca39135.1 |
| scaffold4220 |
Augustus |
exon |
15828 |
17280 |
. |
+ |
. |
ID=Dca39135.1.exon2;Parent=Dca39135.1 |
| scaffold4220 |
Augustus |
exon |
17356 |
17913 |
. |
+ |
. |
ID=Dca39135.1.exon3;Parent=Dca39135.1 |
