Carnation DB

Dca39178.1

Annotation

6-exons
f-1
sp|B9MU02_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1109804#GO:0010044#0F1P0C
AT4G17970.1 | Symbols: ALMT12, ATALMT12 | aluminum-activated, malate transporter 12 | chr4:9975482-9977722 FORWARD LENGTH=560
Repeat List (scaffold4228)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39178.1	43	552	552	62.31	510	67	0
Target_name	Start	End	Length	Cov(%)
sp\|B9MU02_POPTR	4	512	512	99.41

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39178.1	30	524	552	58.33	495	60	9e-175
Target_name	Start	End	Length	Cov(%)
AT4G17970.1	12	533	560	93.21

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4228	Augustus	mRNA	22298	25115	.	+	.	ID=Dca39178.1;Parent=Dca39178
scaffold4228	Augustus	exon	22298	22640	.	+	.	ID=Dca39178.1.exon1;Parent=Dca39178.1
scaffold4228	Augustus	exon	22786	22926	.	+	.	ID=Dca39178.1.exon2;Parent=Dca39178.1
scaffold4228	Augustus	exon	23053	23325	.	+	.	ID=Dca39178.1.exon3;Parent=Dca39178.1
scaffold4228	Augustus	exon	23951	24066	.	+	.	ID=Dca39178.1.exon4;Parent=Dca39178.1
scaffold4228	Augustus	exon	24148	24291	.	+	.	ID=Dca39178.1.exon5;Parent=Dca39178.1
scaffold4228	Augustus	exon	24474	25115	.	+	.	ID=Dca39178.1.exon6;Parent=Dca39178.1