Dca39267.1
Annotation
- 2-exons
- f-248
- sp|A9PBK3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_555508#unknown#0F0P0C
- AT4G05000.1 | Symbols: VPS28-2 | Vacuolar protein sorting-associated protein VPS28 family protein | chr4:2563953-2564585 FORWARD LENGTH=210
- Repeat List (scaffold4241)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39267.1 |
1 |
208 |
209 |
86.6 |
208 |
88 |
7e-106
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A9PBK3_POPTR |
1 |
208 |
209 |
99.52 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39267.1 |
1 |
209 |
209 |
85.16 |
209 |
86 |
4e-106
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G05000.1 |
2 |
210 |
210 |
99.52 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4241 |
PASA |
mRNA |
30183 |
31942 |
. |
+ |
. |
ID=Dca39267.1;Parent=Dca39267 |
| scaffold4241 |
PASA |
exon |
30183 |
30325 |
. |
+ |
. |
ID=Dca39267.1.exon1;Parent=Dca39267.1 |
| scaffold4241 |
PASA |
exon |
30774 |
31942 |
. |
+ |
. |
ID=Dca39267.1.exon2;Parent=Dca39267.1 |
| scaffold4241 |
Augus-PASA |
mRNA |
30602 |
31942 |
. |
+ |
. |
ID=Dca39267.2;Parent=Dca39267 |
| scaffold4241 |
Augus-PASA |
exon |
30602 |
31942 |
. |
+ |
. |
ID=Dca39267.2.exon1;Parent=Dca39267.2 |
