Carnation DB

Dca39307.1

Annotation

6-exons
f-1
sp|Q688L2_ORYSJ#Putative polyprotein#Oryza sativa subsp japonica (Rice)#Name=P0636E04.8#GO:0003676;GO:0015074#1F1P0C
Repeat List (scaffold425)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39307.1	1	99	101	63.36	99	63	5e-34
Target_name	Start	End	Length	Cov(%)
sp\|Q84JX3_CUCSA	180	282	283	36.39

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39307.1	1	97	101	60.39	97	63	5e-33
Target_name	Start	End	Length	Cov(%)
AT5G57550.1	186	282	284	34.15

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold425	Augustus	mRNA	1180	15653	.	+	.	ID=Dca39307.1;Parent=Dca39307
scaffold425	Augustus	exon	1180	1221	.	+	.	ID=Dca39307.1.exon1;Parent=Dca39307.1
scaffold425	Augustus	exon	2271	3090	.	+	.	ID=Dca39307.1.exon2;Parent=Dca39307.1
scaffold425	Augustus	exon	4129	4238	.	+	.	ID=Dca39307.1.exon3;Parent=Dca39307.1
scaffold425	Augustus	exon	4529	7834	.	+	.	ID=Dca39307.1.exon4;Parent=Dca39307.1
scaffold425	Augustus	exon	14488	14621	.	+	.	ID=Dca39307.1.exon5;Parent=Dca39307.1
scaffold425	Augustus	exon	15269	15653	.	+	.	ID=Dca39307.1.exon6;Parent=Dca39307.1