Carnation DB

Dca39316.1

Annotation

5-exons
f-1
sp|F4NCG3_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
Os03t0643433-00 Similar to J013022N21, full insert sequence.
Repeat List (scaffold425)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39316.1	7	223	272	34.19	217	32	4e-29
Target_name	Start	End	Length	Cov(%)
sp\|F4NCG3_BETVU	677	970	1114	26.39

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39316.1	83	178	272	13.6	96	37	2e-13
Target_name	Start	End	Length	Cov(%)
AT3G24255.1	65	166	746	13.67

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold425	Augustus	mRNA	80513	81829	.	+	.	ID=Dca39316.1;Parent=Dca39316
scaffold425	Augustus	exon	80513	80759	.	+	.	ID=Dca39316.1.exon1;Parent=Dca39316.1
scaffold425	Augustus	exon	80896	81145	.	+	.	ID=Dca39316.1.exon2;Parent=Dca39316.1
scaffold425	Augustus	exon	81250	81411	.	+	.	ID=Dca39316.1.exon3;Parent=Dca39316.1
scaffold425	Augustus	exon	81591	81732	.	+	.	ID=Dca39316.1.exon4;Parent=Dca39316.1
scaffold425	Augustus	exon	81812	81829	.	+	.	ID=Dca39316.1.exon5;Parent=Dca39316.1