Dca39322.1
Annotation
- 3-exons
- f-1
- sp|D7MIT2_ARALL#Predicted protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_659431#unknown#0F0P0C
- Repeat List (scaffold425)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39322.1 |
16 |
215 |
531 |
12.99 |
200 |
33 |
1e-14
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7MIT2_ARALL |
9 |
209 |
408 |
49.26 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39322.1 |
16 |
215 |
531 |
13.18 |
200 |
34 |
2e-17
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G41630.1 |
8 |
208 |
455 |
44.17 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold425 |
Augustus |
mRNA |
115322 |
117771 |
. |
+ |
. |
ID=Dca39322.1;Parent=Dca39322 |
| scaffold425 |
Augustus |
exon |
115322 |
116485 |
. |
+ |
. |
ID=Dca39322.1.exon1;Parent=Dca39322.1 |
| scaffold425 |
Augustus |
exon |
116804 |
116965 |
. |
+ |
. |
ID=Dca39322.1.exon2;Parent=Dca39322.1 |
| scaffold425 |
Augustus |
exon |
117502 |
117771 |
. |
+ |
. |
ID=Dca39322.1.exon3;Parent=Dca39322.1 |
