Carnation DB

Dca39351.1

Annotation

6-exons
f-1
sp|G5DWN8_SILLA#Alpha-1,4-galacturonosyltransferase#Silene latifolia (White campion) (Bladder campion)#unknown#GO:0016757#1F0P0C
Repeat List (scaffold4258)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39351.1	34	548	549	89.43	515	96	0
Target_name	Start	End	Length	Cov(%)
sp\|G5DWN8_SILLA	3	517	517	99.61

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39351.1	1	548	549	79.23	548	80	0
Target_name	Start	End	Length	Cov(%)
AT5G15470.1	9	532	532	98.49

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4258	Augustus	mRNA	15212	21731	.	+	.	ID=Dca39351.1;Parent=Dca39351
scaffold4258	Augustus	exon	15212	15473	.	+	.	ID=Dca39351.1.exon1;Parent=Dca39351.1
scaffold4258	Augustus	exon	16568	16620	.	+	.	ID=Dca39351.1.exon2;Parent=Dca39351.1
scaffold4258	Augustus	exon	16701	16856	.	+	.	ID=Dca39351.1.exon3;Parent=Dca39351.1
scaffold4258	Augustus	exon	18499	19089	.	+	.	ID=Dca39351.1.exon4;Parent=Dca39351.1
scaffold4258	Augustus	exon	20071	20373	.	+	.	ID=Dca39351.1.exon5;Parent=Dca39351.1
scaffold4258	Augustus	exon	21447	21731	.	+	.	ID=Dca39351.1.exon6;Parent=Dca39351.1