Carnation DB

Dca3947.1

Annotation

8-exons
f-2
sp|B9RAG9_RICCO#AMP-activated protein kinase, gamma regulatory subunit, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1506390#GO:0016301#1F0P0C
Repeat List (scaffold11427)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3947.1	291	399	476	13.23	109	58	3e-27
Target_name	Start	End	Length	Cov(%)
sp\|B9RAG9_RICCO	102	204	459	22.44

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3947.1	272	399	476	11.97	128	45	9e-20
Target_name	Start	End	Length	Cov(%)
AT3G48530.1	52	168	424	27.59

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold11427	Augustus	mRNA	576	6445	.	+	.	ID=Dca3947.1;Parent=Dca3947
scaffold11427	Augustus	exon	576	697	.	+	.	ID=Dca3947.1.exon1;Parent=Dca3947.1
scaffold11427	Augustus	exon	796	1428	.	+	.	ID=Dca3947.1.exon2;Parent=Dca3947.1
scaffold11427	Augustus	exon	4233	4346	.	+	.	ID=Dca3947.1.exon3;Parent=Dca3947.1
scaffold11427	Augustus	exon	4709	4878	.	+	.	ID=Dca3947.1.exon4;Parent=Dca3947.1
scaffold11427	Augustus	exon	5240	5427	.	+	.	ID=Dca3947.1.exon5;Parent=Dca3947.1
scaffold11427	Augustus	exon	5510	5525	.	+	.	ID=Dca3947.1.exon6;Parent=Dca3947.1
scaffold11427	Augustus	exon	6176	6325	.	+	.	ID=Dca3947.1.exon7;Parent=Dca3947.1
scaffold11427	Augustus	exon	6407	6445	.	+	.	ID=Dca3947.1.exon8;Parent=Dca3947.1