Carnation DB

Dca39518.1

Annotation

8-exons
f-1
sp|F6HEV0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0011g04130#unknown#0F0P0C
AT1G49540.2 | Symbols: ELP2, AtELP2 | elongator protein 2 | chr1:18333767-18337382 REVERSE LENGTH=840
Repeat List (scaffold429)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39518.1	1	645	1049	48.04	645	77	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HEV0_VITVI	173	830	839	78.42

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39518.1	1	645	1049	41.75	645	67	0
Target_name	Start	End	Length	Cov(%)
AT1G49540.2	176	832	840	78.21

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold429	Augustus	mRNA	59127	66638	.	+	.	ID=Dca39518.1;Parent=Dca39518
scaffold429	Augustus	exon	59127	59237	.	+	.	ID=Dca39518.1.exon1;Parent=Dca39518.1
scaffold429	Augustus	exon	59338	60006	.	+	.	ID=Dca39518.1.exon2;Parent=Dca39518.1
scaffold429	Augustus	exon	61683	61998	.	+	.	ID=Dca39518.1.exon3;Parent=Dca39518.1
scaffold429	Augustus	exon	62141	62358	.	+	.	ID=Dca39518.1.exon4;Parent=Dca39518.1
scaffold429	Augustus	exon	62807	62984	.	+	.	ID=Dca39518.1.exon5;Parent=Dca39518.1
scaffold429	Augustus	exon	63528	63970	.	+	.	ID=Dca39518.1.exon6;Parent=Dca39518.1
scaffold429	Augustus	exon	65317	66485	.	+	.	ID=Dca39518.1.exon7;Parent=Dca39518.1
scaffold429	Augustus	exon	66593	66638	.	+	.	ID=Dca39518.1.exon8;Parent=Dca39518.1