Carnation DB

Dca39567.1

Annotation

8-exons
f-1
sp|B9HQQ4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_558337#GO:0008080;GO:0008270#2F0P0C
AT2G27980.1 | Symbols: | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain | chr2:11913950-11919741 REVERSE LENGTH=1072
Repeat List (scaffold4297)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39567.1	103	386	409	32.27	284	43	4e-60
Target_name	Start	End	Length	Cov(%)
sp\|B9HQQ4_POPTR	261	563	955	31.72

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39567.1	108	365	409	28.11	258	37	5e-49
Target_name	Start	End	Length	Cov(%)
AT2G27980.1	349	664	1072	29.47

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4297	Augustus	mRNA	26899	30675	.	-	.	ID=Dca39567.1;Parent=Dca39567
scaffold4297	Augustus	exon	26899	27034	.	-	.	ID=Dca39567.1.exon1;Parent=Dca39567.1
scaffold4297	Augustus	exon	27194	27246	.	-	.	ID=Dca39567.1.exon2;Parent=Dca39567.1
scaffold4297	Augustus	exon	27511	27592	.	-	.	ID=Dca39567.1.exon3;Parent=Dca39567.1
scaffold4297	Augustus	exon	27698	27790	.	-	.	ID=Dca39567.1.exon4;Parent=Dca39567.1
scaffold4297	Augustus	exon	28181	28298	.	-	.	ID=Dca39567.1.exon5;Parent=Dca39567.1
scaffold4297	Augustus	exon	28394	28595	.	-	.	ID=Dca39567.1.exon6;Parent=Dca39567.1
scaffold4297	Augustus	exon	29208	29291	.	-	.	ID=Dca39567.1.exon7;Parent=Dca39567.1
scaffold4297	Augustus	exon	30214	30675	.	-	.	ID=Dca39567.1.exon8;Parent=Dca39567.1