Carnation DB

Dca39624.1

Annotation

5-exons
f-1
sp|B9HNI4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_557709#unknown#0F0P0C
Os01t0281000-01 Cyclin-like F-box domain containing protein.
Repeat List (scaffold43)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39624.1	11	349	349	62.75	339	65	1e-129
Target_name	Start	End	Length	Cov(%)
sp\|B9HNI4_POPTR	69	405	405	83.2

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39624.1	36	349	349	55.87	314	61	6e-116
Target_name	Start	End	Length	Cov(%)
Os01t0281000-01	97	415	416	76.68

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold43	Augustus	mRNA	398225	399642	.	+	.	ID=Dca39624.1;Parent=Dca39624
scaffold43	Augustus	exon	398225	398752	.	+	.	ID=Dca39624.1.exon1;Parent=Dca39624.1
scaffold43	Augustus	exon	398847	398926	.	+	.	ID=Dca39624.1.exon2;Parent=Dca39624.1
scaffold43	Augustus	exon	399019	399197	.	+	.	ID=Dca39624.1.exon3;Parent=Dca39624.1
scaffold43	Augustus	exon	399291	399365	.	+	.	ID=Dca39624.1.exon4;Parent=Dca39624.1
scaffold43	Augustus	exon	399455	399642	.	+	.	ID=Dca39624.1.exon5;Parent=Dca39624.1