Dca39630.1
Annotation
- 3-exons
- f-1
- sp|D7U230_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_14s0128g00740#unknown#0F0P0C
- AT5G12260.1 | Symbols: | BEST Arabidopsis thaliana protein match is: glycosyltransferase family protein 2 (TAIR:AT5G60700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:3966417-3968684 FORWARD LENGTH=624
- Repeat List (scaffold43)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39630.1 |
32 |
623 |
623 |
55.85 |
592 |
57 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7U230_VITVI |
31 |
638 |
638 |
95.29 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39630.1 |
15 |
623 |
623 |
50.56 |
609 |
52 |
2e-176
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G12260.1 |
22 |
624 |
624 |
96.63 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold43 |
Augustus |
mRNA |
443605 |
446577 |
. |
- |
. |
ID=Dca39630.1;Parent=Dca39630 |
| scaffold43 |
Augustus |
exon |
443605 |
444675 |
. |
- |
. |
ID=Dca39630.1.exon1;Parent=Dca39630.1 |
| scaffold43 |
Augustus |
exon |
444756 |
444919 |
. |
- |
. |
ID=Dca39630.1.exon2;Parent=Dca39630.1 |
| scaffold43 |
Augustus |
exon |
445941 |
446577 |
. |
- |
. |
ID=Dca39630.1.exon3;Parent=Dca39630.1 |
