Carnation DB

Dca39717.1

Annotation

8-exons
f-1
sp|B9GG23_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_797535#GO:0005634;GO:0005524;GO:0004003;GO:0003677#3F0P1C
Os05t0219800-01 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site domain containing protein.
Repeat List (scaffold431)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39717.1	14	892	894	64.65	879	64	0
Target_name	Start	End	Length	Cov(%)
sp\|B9GG23_POPTR	2	915	918	99.56

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39717.1	13	887	894	59.73	875	60	0
Target_name	Start	End	Length	Cov(%)
AT1G79890.1	5	869	882	98.07

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold431	Augustus	mRNA	37626	42647	.	-	.	ID=Dca39717.1;Parent=Dca39717
scaffold431	Augustus	exon	37626	37837	.	-	.	ID=Dca39717.1.exon1;Parent=Dca39717.1
scaffold431	Augustus	exon	38224	38785	.	-	.	ID=Dca39717.1.exon2;Parent=Dca39717.1
scaffold431	Augustus	exon	39032	39253	.	-	.	ID=Dca39717.1.exon3;Parent=Dca39717.1
scaffold431	Augustus	exon	39355	39594	.	-	.	ID=Dca39717.1.exon4;Parent=Dca39717.1
scaffold431	Augustus	exon	39675	39959	.	-	.	ID=Dca39717.1.exon5;Parent=Dca39717.1
scaffold431	Augustus	exon	40450	40803	.	-	.	ID=Dca39717.1.exon6;Parent=Dca39717.1
scaffold431	Augustus	exon	41508	41596	.	-	.	ID=Dca39717.1.exon7;Parent=Dca39717.1
scaffold431	Augustus	exon	41927	42647	.	-	.	ID=Dca39717.1.exon8;Parent=Dca39717.1