Carnation DB

Dca39719.1

Annotation

7-exons
f-1
sp|D7U0H1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_09s0002g04210#GO:0005524;GO:0004674#2F0P0C
Os05t0218400-01 Similar to Somatic embryogenesis receptor kinase-like protein.
Repeat List (scaffold431)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39719.1	58	583	596	49.49	526	55	2e-150
Target_name	Start	End	Length	Cov(%)
sp\|D7U0H1_VITVI	50	543	551	89.65

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39719.1	126	582	596	46.3	457	58	5e-147
Target_name	Start	End	Length	Cov(%)
Os05t0218400-01	216	661	676	65.97

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold431	Augustus	mRNA	51292	55062	.	+	.	ID=Dca39719.1;Parent=Dca39719
scaffold431	Augustus	exon	51292	51640	.	+	.	ID=Dca39719.1.exon1;Parent=Dca39719.1
scaffold431	Augustus	exon	52672	53157	.	+	.	ID=Dca39719.1.exon2;Parent=Dca39719.1
scaffold431	Augustus	exon	53563	53649	.	+	.	ID=Dca39719.1.exon3;Parent=Dca39719.1
scaffold431	Augustus	exon	53741	53811	.	+	.	ID=Dca39719.1.exon4;Parent=Dca39719.1
scaffold431	Augustus	exon	53985	54305	.	+	.	ID=Dca39719.1.exon5;Parent=Dca39719.1
scaffold431	Augustus	exon	54483	54641	.	+	.	ID=Dca39719.1.exon6;Parent=Dca39719.1
scaffold431	Augustus	exon	54745	55062	.	+	.	ID=Dca39719.1.exon7;Parent=Dca39719.1