Carnation DB

Dca3974.1

Annotation

5-exons
f-1
sp|B9IIR7_POPTR#Peptidyl-prolyl cis-trans isomerase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_835479#GO:0003755;GO:0006457#1F1P0C
Repeat List (scaffold1144)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3974.1	2	165	165	89.09	164	90	1e-84
Target_name	Start	End	Length	Cov(%)
sp\|B9IIR7_POPTR	1	164	164	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3974.1	2	165	165	84.84	164	86	5e-83
Target_name	Start	End	Length	Cov(%)
AT2G36130.1	1	164	164	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1144	Augustus	mRNA	36056	39296	.	+	.	ID=Dca3974.1;Parent=Dca3974
scaffold1144	Augustus	exon	36056	36226	.	+	.	ID=Dca3974.1.exon1;Parent=Dca3974.1
scaffold1144	Augus-PASA	exon	36325	36386	.	+	.	ID=Dca3974.1.exon2;Parent=Dca3974.1
scaffold1144	Augus-PASA	exon	37280	37413	.	+	.	ID=Dca3974.1.exon3;Parent=Dca3974.1
scaffold1144	Augus-PASA	exon	38557	38641	.	+	.	ID=Dca3974.1.exon4;Parent=Dca3974.1
scaffold1144	Augus-PASA	exon	39251	39296	.	+	.	ID=Dca3974.1.exon5;Parent=Dca3974.1