Dca39794.1
Annotation
- 4-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q8RVC8_ORYSJ#Putative polyprotein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0049K09.5#GO:0003676;GO:0008270#2F0P0C
- Repeat List (scaffold432)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39794.1 |
26 |
708 |
720 |
40.69 |
683 |
38 |
2e-127
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
9 |
756 |
1717 |
43.56 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39794.1 |
461 |
555 |
720 |
4.58 |
95 |
35 |
3e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
191 |
192 |
48.95 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold432 |
Augustus |
mRNA |
105804 |
108290 |
. |
+ |
. |
ID=Dca39794.1;Parent=Dca39794 |
| scaffold432 |
Augustus |
exon |
105804 |
105914 |
. |
+ |
. |
ID=Dca39794.1.exon1;Parent=Dca39794.1 |
| scaffold432 |
Augustus |
exon |
106056 |
106404 |
. |
+ |
. |
ID=Dca39794.1.exon2;Parent=Dca39794.1 |
| scaffold432 |
Augustus |
exon |
106507 |
107132 |
. |
+ |
. |
ID=Dca39794.1.exon3;Parent=Dca39794.1 |
| scaffold432 |
Augustus |
exon |
107214 |
108290 |
. |
+ |
. |
ID=Dca39794.1.exon4;Parent=Dca39794.1 |
