Carnation DB

Dca39834.1

Annotation

6-exons
f-1
sp|B9H6W7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_559021#unknown#0F0P0C
Repeat List (scaffold433)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39834.1	4	243	243	62.13	240	63	3e-72
Target_name	Start	End	Length	Cov(%)
sp\|B9H6W7_POPTR	16	241	241	93.77

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39834.1	12	242	243	52.26	231	55	2e-62
Target_name	Start	End	Length	Cov(%)
AT5G49710.3	17	234	235	92.76

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold433	Augus-PASA	mRNA	18380	20589	.	-	.	ID=Dca39834.1;Parent=Dca39834
scaffold433	Augus-PASA	exon	18380	18461	.	-	.	ID=Dca39834.1.exon1;Parent=Dca39834.1
scaffold433	Augus-PASA	exon	18547	18655	.	-	.	ID=Dca39834.1.exon2;Parent=Dca39834.1
scaffold433	Augus-PASA	exon	18744	18771	.	-	.	ID=Dca39834.1.exon3;Parent=Dca39834.1
scaffold433	Augus-PASA	exon	19340	19497	.	-	.	ID=Dca39834.1.exon4;Parent=Dca39834.1
scaffold433	Augus-PASA	exon	19579	19669	.	-	.	ID=Dca39834.1.exon5;Parent=Dca39834.1
scaffold433	Augus-PASA	exon	20326	20589	.	-	.	ID=Dca39834.1.exon6;Parent=Dca39834.1