Dca39847.1
Annotation
- 4-exons
- f-1
- sp|B9GUA9_POPTR#Cc-nbs-lrr resistance protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_645150#GO:0043531;GO:0006952#1F1P0C
- Repeat List (scaffold433)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39847.1 |
46 |
396 |
401 |
32.16 |
351 |
37 |
3e-47
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9GUA9_POPTR |
7 |
338 |
1133 |
29.3 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39847.1 |
76 |
400 |
401 |
24.18 |
325 |
30 |
7e-33
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0543500-01 |
66 |
374 |
1154 |
26.77 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold433 |
Augustus |
mRNA |
129121 |
134102 |
. |
+ |
. |
ID=Dca39847.1;Parent=Dca39847 |
| scaffold433 |
Augustus |
exon |
129121 |
129195 |
. |
+ |
. |
ID=Dca39847.1.exon1;Parent=Dca39847.1 |
| scaffold433 |
Augustus |
exon |
129906 |
129963 |
. |
+ |
. |
ID=Dca39847.1.exon2;Parent=Dca39847.1 |
| scaffold433 |
Augustus |
exon |
131421 |
132044 |
. |
+ |
. |
ID=Dca39847.1.exon3;Parent=Dca39847.1 |
| scaffold433 |
Augustus |
exon |
133654 |
134102 |
. |
+ |
. |
ID=Dca39847.1.exon4;Parent=Dca39847.1 |
