Carnation DB

Dca39930.1

Annotation

6-exons
f-1
sp|B9GSY7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_830473#GO:0016620#1F0P0C
sp|Q94G64_MAIZE#T-cytoplasm male sterility restorer factor 2#Zea mays (Maize)#Name=rf2#GO:0016620#1F0P0C
Repeat List (scaffold4347)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39930.1	1	195	195	65.64	195	46	6e-52
Target_name	Start	End	Length	Cov(%)
sp\|B9GSY7_POPTR	1	278	540	51.48

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39930.1	26	195	195	59.48	170	48	1e-50
Target_name	Start	End	Length	Cov(%)
Os06t0270900-01	43	287	550	44.54

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4347	Augustus	mRNA	24736	26657	.	+	.	ID=Dca39930.1;Parent=Dca39930
scaffold4347	Augustus	exon	24736	24796	.	+	.	ID=Dca39930.1.exon1;Parent=Dca39930.1
scaffold4347	Augustus	exon	25386	25520	.	+	.	ID=Dca39930.1.exon2;Parent=Dca39930.1
scaffold4347	Augustus	exon	25771	25826	.	+	.	ID=Dca39930.1.exon3;Parent=Dca39930.1
scaffold4347	Augustus	exon	25918	26071	.	+	.	ID=Dca39930.1.exon4;Parent=Dca39930.1
scaffold4347	Augustus	exon	26233	26324	.	+	.	ID=Dca39930.1.exon5;Parent=Dca39930.1
scaffold4347	Augustus	exon	26568	26657	.	+	.	ID=Dca39930.1.exon6;Parent=Dca39930.1