Carnation DB

Dca39948.1

Annotation

6-exons
f-1
sp|D7L8F4_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_341139#GO:0051539;GO:0004519;GO:0006284#2F1P0C
Os02t0496500-01 HhH-GPD domain domain containing protein.
Repeat List (scaffold435)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39948.1	61	153	153	27.45	93	36	5e-10
Target_name	Start	End	Length	Cov(%)
sp\|D7L8F4_ARALL	913	1029	1078	10.85

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39948.1	63	153	153	24.18	91	33	2e-09
Target_name	Start	End	Length	Cov(%)
Os02t0496500-01	1025	1135	1208	9.18

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold435	Augustus	mRNA	50695	53989	.	-	.	ID=Dca39948.1;Parent=Dca39948
scaffold435	Augustus	exon	50695	50814	.	-	.	ID=Dca39948.1.exon1;Parent=Dca39948.1
scaffold435	Augustus	exon	51023	51060	.	-	.	ID=Dca39948.1.exon2;Parent=Dca39948.1
scaffold435	Augustus	exon	51351	51408	.	-	.	ID=Dca39948.1.exon3;Parent=Dca39948.1
scaffold435	Augustus	exon	52081	52117	.	-	.	ID=Dca39948.1.exon4;Parent=Dca39948.1
scaffold435	Augustus	exon	52218	52364	.	-	.	ID=Dca39948.1.exon5;Parent=Dca39948.1
scaffold435	Augustus	exon	53928	53989	.	-	.	ID=Dca39948.1.exon6;Parent=Dca39948.1