Dca4002.1
Annotation
- 3-exons
- f-1
- sp|Q3I6J4_SILLA#Pol-polyprotein#Silene latifolia (White campion) (Bladder campion)#Name=pol#GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold11465)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4002.1 |
2 |
216 |
217 |
55.29 |
215 |
55 |
4e-63
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q3I6J4_SILLA |
708 |
924 |
1307 |
16.6 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4002.1 |
46 |
168 |
217 |
17.51 |
123 |
31 |
8e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G01410.1 |
170 |
292 |
294 |
41.83 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold11465 |
Augustus |
mRNA |
113 |
1902 |
. |
+ |
. |
ID=Dca4002.1;Parent=Dca4002 |
| scaffold11465 |
Augustus |
exon |
113 |
765 |
. |
+ |
. |
ID=Dca4002.1.exon1;Parent=Dca4002.1 |
| scaffold11465 |
Augustus |
exon |
1027 |
1243 |
. |
+ |
. |
ID=Dca4002.1.exon2;Parent=Dca4002.1 |
| scaffold11465 |
Augustus |
exon |
1465 |
1902 |
. |
+ |
. |
ID=Dca4002.1.exon3;Parent=Dca4002.1 |
