Carnation DB

Dca40180.1

Annotation

8-exons
f-1
sp|D7SNP4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0029g00640#unknown#0F0P0C
AT3G23910.1 | Symbols: | BEST Arabidopsis thaliana protein match is: RNA-directed DNA polymerase (reverse transcriptase)-related family protein (TAIR:AT3G24255.2); Has 562 Blast hits to 532 proteins in 147 species: Archae - 28; Bacteria - 51; Metazoa - 157; Fungi - 82; Plants - 85; Viruses - 6; Other Eukaryotes - 153 (source: NCBI BLink). | chr3:8636594-8639344 REVERSE LENGTH=421
Repeat List (scaffold4391)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40180.1	46	294	295	47.45	249	55	7e-75
Target_name	Start	End	Length	Cov(%)
sp\|D7SNP4_VITVI	160	417	425	60.7

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40180.1	31	294	295	41.35	264	45	4e-61
Target_name	Start	End	Length	Cov(%)
AT3G23910.1	139	413	421	65.32

seqname	source	feature	start	end	score	strand	frame	group
scaffold4391	Augustus	mRNA	23581	28102	.	+	.	ID=Dca40180.1;Parent=Dca40180
scaffold4391	Augustus	exon	23581	23618	.	+	.	ID=Dca40180.1.exon1;Parent=Dca40180.1
scaffold4391	Augustus	exon	23723	23828	.	+	.	ID=Dca40180.1.exon2;Parent=Dca40180.1
scaffold4391	Augustus	exon	25221	25300	.	+	.	ID=Dca40180.1.exon3;Parent=Dca40180.1
scaffold4391	Augustus	exon	25415	25610	.	+	.	ID=Dca40180.1.exon4;Parent=Dca40180.1
scaffold4391	Augustus	exon	26525	26580	.	+	.	ID=Dca40180.1.exon5;Parent=Dca40180.1
scaffold4391	Augustus	exon	26910	27032	.	+	.	ID=Dca40180.1.exon6;Parent=Dca40180.1
scaffold4391	Augustus	exon	27444	27627	.	+	.	ID=Dca40180.1.exon7;Parent=Dca40180.1
scaffold4391	Augustus	exon	27998	28102	.	+	.	ID=Dca40180.1.exon8;Parent=Dca40180.1