Carnation DB

Dca40182.1

Annotation

33-exons
f-1
sp|A5BVH7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_023142#GO:0005488#1F0P0C
AT2G02955.1 | Symbols: MEE12 | maternal effect embryo arrest 12 | chr2:859592-861772 FORWARD LENGTH=666
Repeat List (scaffold4391)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40182.1	900	3257	3257	38.71	2358	51	0
Target_name	Start	End	Length	Cov(%)
sp\|A5BVH7_VITVI	40	2461	2461	98.41

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40182.1	659	3255	3257	35.95	2597	43	0
Target_name	Start	End	Length	Cov(%)
AT4G30990.2	11	2617	2620	99.5

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4391	Augustus	mRNA	40400	61614	.	-	.	ID=Dca40182.1;Parent=Dca40182
scaffold4391	Augustus	exon	40400	40656	.	-	.	ID=Dca40182.1.exon1;Parent=Dca40182.1
scaffold4391	Augustus	exon	40890	41022	.	-	.	ID=Dca40182.1.exon2;Parent=Dca40182.1
scaffold4391	Augustus	exon	41178	41687	.	-	.	ID=Dca40182.1.exon3;Parent=Dca40182.1
scaffold4391	Augustus	exon	41921	42154	.	-	.	ID=Dca40182.1.exon4;Parent=Dca40182.1
scaffold4391	Augustus	exon	42465	42744	.	-	.	ID=Dca40182.1.exon5;Parent=Dca40182.1
scaffold4391	Augustus	exon	42823	44615	.	-	.	ID=Dca40182.1.exon6;Parent=Dca40182.1
scaffold4391	Augustus	exon	44723	44788	.	-	.	ID=Dca40182.1.exon7;Parent=Dca40182.1
scaffold4391	Augustus	exon	45312	45437	.	-	.	ID=Dca40182.1.exon8;Parent=Dca40182.1
scaffold4391	Augustus	exon	45612	45977	.	-	.	ID=Dca40182.1.exon9;Parent=Dca40182.1
scaffold4391	Augustus	exon	46091	46272	.	-	.	ID=Dca40182.1.exon10;Parent=Dca40182.1
scaffold4391	Augustus	exon	46437	46573	.	-	.	ID=Dca40182.1.exon11;Parent=Dca40182.1
scaffold4391	Augustus	exon	47096	47559	.	-	.	ID=Dca40182.1.exon12;Parent=Dca40182.1
scaffold4391	Augustus	exon	48074	48523	.	-	.	ID=Dca40182.1.exon13;Parent=Dca40182.1
scaffold4391	Augustus	exon	48652	48913	.	-	.	ID=Dca40182.1.exon14;Parent=Dca40182.1
scaffold4391	Augustus	exon	49077	49154	.	-	.	ID=Dca40182.1.exon15;Parent=Dca40182.1
scaffold4391	Augustus	exon	49250	49427	.	-	.	ID=Dca40182.1.exon16;Parent=Dca40182.1
scaffold4391	Augustus	exon	49730	50084	.	-	.	ID=Dca40182.1.exon17;Parent=Dca40182.1
scaffold4391	Augustus	exon	50314	50434	.	-	.	ID=Dca40182.1.exon18;Parent=Dca40182.1
scaffold4391	Augustus	exon	50543	50756	.	-	.	ID=Dca40182.1.exon19;Parent=Dca40182.1
scaffold4391	Augustus	exon	51531	51877	.	-	.	ID=Dca40182.1.exon20;Parent=Dca40182.1
scaffold4391	Augustus	exon	51987	52058	.	-	.	ID=Dca40182.1.exon21;Parent=Dca40182.1
scaffold4391	Augustus	exon	52149	52359	.	-	.	ID=Dca40182.1.exon22;Parent=Dca40182.1
scaffold4391	Augustus	exon	52454	52657	.	-	.	ID=Dca40182.1.exon23;Parent=Dca40182.1
scaffold4391	Augustus	exon	52783	52965	.	-	.	ID=Dca40182.1.exon24;Parent=Dca40182.1
scaffold4391	Augustus	exon	53757	53863	.	-	.	ID=Dca40182.1.exon25;Parent=Dca40182.1
scaffold4391	Augustus	exon	53984	54057	.	-	.	ID=Dca40182.1.exon26;Parent=Dca40182.1
scaffold4391	Augustus	exon	54154	54232	.	-	.	ID=Dca40182.1.exon27;Parent=Dca40182.1
scaffold4391	Augustus	exon	55521	55678	.	-	.	ID=Dca40182.1.exon28;Parent=Dca40182.1
scaffold4391	Augustus	exon	56870	56989	.	-	.	ID=Dca40182.1.exon29;Parent=Dca40182.1
scaffold4391	Augustus	exon	58555	59091	.	-	.	ID=Dca40182.1.exon30;Parent=Dca40182.1
scaffold4391	Augustus	exon	59185	59312	.	-	.	ID=Dca40182.1.exon31;Parent=Dca40182.1
scaffold4391	Augustus	exon	59415	60254	.	-	.	ID=Dca40182.1.exon32;Parent=Dca40182.1
scaffold4391	Augustus	exon	61107	61614	.	-	.	ID=Dca40182.1.exon33;Parent=Dca40182.1