Carnation DB

Dca40227.1

Annotation

5-exons
f-1
sp|F6HCA1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0067g01990#GO:0035091;GO:0007154#1F1P0C
AT5G07120.1 | Symbols: SNX2b | sorting nexin 2B | chr5:2207065-2209355 REVERSE LENGTH=572
Repeat List (scaffold44)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40227.1	51	535	536	63.8	485	70	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HCA1_VITVI	74	557	560	86.42

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40227.1	54	535	536	58.76	482	65	0
Target_name	Start	End	Length	Cov(%)
AT5G07120.1	81	569	572	85.48

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold44	Augustus	mRNA	165994	170254	.	+	.	ID=Dca40227.1;Parent=Dca40227
scaffold44	Augustus	exon	165994	166971	.	+	.	ID=Dca40227.1.exon1;Parent=Dca40227.1
scaffold44	Augustus	exon	167921	168130	.	+	.	ID=Dca40227.1.exon2;Parent=Dca40227.1
scaffold44	Augustus	exon	169142	169402	.	+	.	ID=Dca40227.1.exon3;Parent=Dca40227.1
scaffold44	Augustus	exon	169740	169826	.	+	.	ID=Dca40227.1.exon4;Parent=Dca40227.1
scaffold44	Augustus	exon	170180	170254	.	+	.	ID=Dca40227.1.exon5;Parent=Dca40227.1