Carnation DB

Dca4024.1

Annotation

5-exons
f-1
sp|B9S614_RICCO#XPA-binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1063020#GO:0005634;GO:0005488;GO:0006397#1F1P1C
Repeat List (scaffold1148)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4024.1	4	917	919	78.12	914	78	0
Target_name	Start	End	Length	Cov(%)
sp\|B9S614_RICCO	2	915	916	99.78

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4024.1	4	919	919	74.21	916	74	0
Target_name	Start	End	Length	Cov(%)
AT5G28740.1	2	917	917	99.89

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1148	Augustus	mRNA	52521	58548	.	-	.	ID=Dca4024.1;Parent=Dca4024
scaffold1148	Augustus	exon	52521	52949	.	-	.	ID=Dca4024.1.exon1;Parent=Dca4024.1
scaffold1148	Augustus	exon	54006	54458	.	-	.	ID=Dca4024.1.exon2;Parent=Dca4024.1
scaffold1148	Augustus	exon	54920	55090	.	-	.	ID=Dca4024.1.exon3;Parent=Dca4024.1
scaffold1148	Augustus	exon	55177	55361	.	-	.	ID=Dca4024.1.exon4;Parent=Dca4024.1
scaffold1148	Augustus	exon	57027	58548	.	-	.	ID=Dca4024.1.exon5;Parent=Dca4024.1