Carnation DB

Dca40316.1

Annotation

5-exons
f-1
sp|B9RH13_RICCO#Translocon-associated protein, beta subunit, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1445980#GO:0005783;GO:0016021#0F0P2C
Repeat List (scaffold441)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40316.1	13	197	198	54.04	185	58	2e-55
Target_name	Start	End	Length	Cov(%)
sp\|B9RH13_RICCO	9	189	208	87.01

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40316.1	8	198	198	48.48	191	50	8e-49
Target_name	Start	End	Length	Cov(%)
AT5G14030.1	3	194	195	98.46

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold441	Augus-PASA	mRNA	45585	49327	.	-	.	ID=Dca40316.1;Parent=Dca40316
scaffold441	Augus-PASA	exon	45585	45704	.	-	.	ID=Dca40316.1.exon1;Parent=Dca40316.1
scaffold441	Augus-PASA	exon	46942	47013	.	-	.	ID=Dca40316.1.exon2;Parent=Dca40316.1
scaffold441	Augus-PASA	exon	47098	47206	.	-	.	ID=Dca40316.1.exon3;Parent=Dca40316.1
scaffold441	Augus-PASA	exon	47307	47405	.	-	.	ID=Dca40316.1.exon4;Parent=Dca40316.1
scaffold441	Augus-PASA	exon	49131	49327	.	-	.	ID=Dca40316.1.exon5;Parent=Dca40316.1