Dca40320.1
Annotation
- 4-exons
- f-1
- sp|Q2AA09_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=20.t00008#GO:0003676;GO:0008270#2F0P0C
- Repeat List (scaffold441)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40320.1 |
2 |
191 |
268 |
26.49 |
190 |
32 |
7e-20
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2AA09_ASPOF |
13 |
221 |
275 |
76 |
AtOs (Arabidopsis thaliana & Oryza sativa)
No data
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold441 |
Augustus |
mRNA |
90717 |
96894 |
. |
+ |
. |
ID=Dca40320.1;Parent=Dca40320 |
| scaffold441 |
Augustus |
exon |
90717 |
90921 |
. |
+ |
. |
ID=Dca40320.1.exon1;Parent=Dca40320.1 |
| scaffold441 |
Augustus |
exon |
91020 |
91334 |
. |
+ |
. |
ID=Dca40320.1.exon2;Parent=Dca40320.1 |
| scaffold441 |
Augustus |
exon |
91793 |
91978 |
. |
+ |
. |
ID=Dca40320.1.exon3;Parent=Dca40320.1 |
| scaffold441 |
Augustus |
exon |
96794 |
96894 |
. |
+ |
. |
ID=Dca40320.1.exon4;Parent=Dca40320.1 |
