Carnation DB

Dca40342.1

Annotation

5-exons
f-1
sp|B9GJX3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1069996#unknown#0F0P0C
AT5G55580.1 | Symbols: | Mitochondrial transcription termination factor family protein | chr5:22515601-22517408 FORWARD LENGTH=496
Repeat List (scaffold4413)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40342.1	48	493	493	56.38	446	59	6e-155
Target_name	Start	End	Length	Cov(%)
sp\|B9GJX3_POPTR	1	447	448	99.77

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40342.1	156	493	493	48.47	338	71	2e-142
Target_name	Start	End	Length	Cov(%)
AT5G55580.1	158	495	496	68.14

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4413	Augustus	mRNA	16416	20011	.	+	.	ID=Dca40342.1;Parent=Dca40342
scaffold4413	Augustus	exon	16416	16754	.	+	.	ID=Dca40342.1.exon1;Parent=Dca40342.1
scaffold4413	Augustus	exon	18626	18707	.	+	.	ID=Dca40342.1.exon2;Parent=Dca40342.1
scaffold4413	Augustus	exon	18790	18842	.	+	.	ID=Dca40342.1.exon3;Parent=Dca40342.1
scaffold4413	Augustus	exon	18918	19610	.	+	.	ID=Dca40342.1.exon4;Parent=Dca40342.1
scaffold4413	Augustus	exon	19697	20011	.	+	.	ID=Dca40342.1.exon5;Parent=Dca40342.1