Dca40394.1
Annotation
- 3-exons
- f-1
- sp|Q9FLA4_ARATH#Polyprotein#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold4422)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40394.1 |
2 |
303 |
317 |
54.88 |
302 |
58 |
9e-99
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BCL1_VITVI |
172 |
473 |
478 |
63.17 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40394.1 |
2 |
288 |
317 |
37.53 |
287 |
42 |
4e-65
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1103 |
1389 |
1401 |
20.48 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4422 |
Augustus |
mRNA |
1393 |
5484 |
. |
- |
. |
ID=Dca40394.1;Parent=Dca40394 |
| scaffold4422 |
Augustus |
exon |
1393 |
2381 |
. |
- |
. |
ID=Dca40394.1.exon1;Parent=Dca40394.1 |
| scaffold4422 |
Augustus |
exon |
2565 |
4742 |
. |
- |
. |
ID=Dca40394.1.exon2;Parent=Dca40394.1 |
| scaffold4422 |
Augustus |
exon |
4872 |
5484 |
. |
- |
. |
ID=Dca40394.1.exon3;Parent=Dca40394.1 |
