Dca40407.1
Annotation
- 3-exons
- f-1
- sp|Q6L3N8_SOLDE#Putative gag-pol polyprotein, identical#Solanum demissum (Wild potato)#ORFNames=SDM1_42t00010#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold4426)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40407.1 |
49 |
142 |
179 |
32.96 |
94 |
48 |
6e-25
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q6L3N8_SOLDE |
315 |
439 |
1333 |
9.37 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40407.1 |
46 |
138 |
179 |
16.2 |
93 |
32 |
1e-07
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
380 |
468 |
1401 |
6.35 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4426 |
Augustus |
mRNA |
8597 |
9364 |
. |
+ |
. |
ID=Dca40407.1;Parent=Dca40407 |
| scaffold4426 |
Augustus |
exon |
8597 |
8742 |
. |
+ |
. |
ID=Dca40407.1.exon1;Parent=Dca40407.1 |
| scaffold4426 |
Augustus |
exon |
8877 |
8994 |
. |
+ |
. |
ID=Dca40407.1.exon2;Parent=Dca40407.1 |
| scaffold4426 |
Augustus |
exon |
9089 |
9364 |
. |
+ |
. |
ID=Dca40407.1.exon3;Parent=Dca40407.1 |
