Dca40431.1
Annotation
- 4-exons
- f-1
- sp|B9SSN2_RICCO#Nitrogen fixation protein nifU, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1374380#GO:0005506;GO:0051536;GO:0016226#2F1P0C
- Repeat List (scaffold443)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40431.1 |
55 |
277 |
278 |
58.63 |
223 |
74 |
1e-79
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9SSN2_RICCO |
41 |
226 |
226 |
82.3 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40431.1 |
66 |
278 |
278 |
52.51 |
213 |
69 |
1e-74
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0181500-01 |
46 |
228 |
229 |
79.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold443 |
Augustus |
mRNA |
106187 |
109865 |
. |
+ |
. |
ID=Dca40431.1;Parent=Dca40431 |
| scaffold443 |
Augustus |
exon |
106187 |
106312 |
. |
+ |
. |
ID=Dca40431.1.exon1;Parent=Dca40431.1 |
| scaffold443 |
Augustus |
exon |
106568 |
106685 |
. |
+ |
. |
ID=Dca40431.1.exon2;Parent=Dca40431.1 |
| scaffold443 |
Augustus |
exon |
109155 |
109555 |
. |
+ |
. |
ID=Dca40431.1.exon3;Parent=Dca40431.1 |
| scaffold443 |
Augustus |
exon |
109674 |
109865 |
. |
+ |
. |
ID=Dca40431.1.exon4;Parent=Dca40431.1 |
