Carnation DB

Dca40489.1

Annotation

5-exons
f-1
sp|B9HDC5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_716781#GO:0005524;GO:0008026;GO:0003676#3F0P0C
Os02t0146600-01 Similar to Eukaryotic initiation factor 4A (eIF4A) (eIF-4A).
Repeat List (scaffold4438)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40489.1	25	436	436	85.77	412	91	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HDC5_POPTR	1	413	413	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40489.1	25	436	436	85.55	412	91	0
Target_name	Start	End	Length	Cov(%)
Os02t0146600-01	1	414	415	99.75

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4438	Augustus	mRNA	22401	24288	.	-	.	ID=Dca40489.1;Parent=Dca40489
scaffold4438	Augustus	exon	22401	23036	.	-	.	ID=Dca40489.1.exon1;Parent=Dca40489.1
scaffold4438	Augustus	exon	23283	23713	.	-	.	ID=Dca40489.1.exon2;Parent=Dca40489.1
scaffold4438	Augustus	exon	23797	23903	.	-	.	ID=Dca40489.1.exon3;Parent=Dca40489.1
scaffold4438	Augustus	exon	23996	24062	.	-	.	ID=Dca40489.1.exon4;Parent=Dca40489.1
scaffold4438	Augustus	exon	24219	24288	.	-	.	ID=Dca40489.1.exon5;Parent=Dca40489.1