Carnation DB

Dca4064.1

Annotation

6-exons
f-1
sp|C6TAW8_SOYBN#Putative uncharacterized protein#Glycine max (Soybean) (Glycine hispida)#unknown#GO:0005740;GO:0004129#1F0P1C
sp|Q1EMP4_PLAMJ#Cytochrome c oxidase subunit 5b#Plantago major (Common plantain)#Name=cox5b#GO:0005740;GO:0004129#1F0P1C
Repeat List (scaffold115)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4064.1	1	163	164	65.85	163	66	9e-56
Target_name	Start	End	Length	Cov(%)
sp\|C6TAW8_SOYBN	1	160	160	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4064.1	1	145	164	59.14	145	62	4e-48
Target_name	Start	End	Length	Cov(%)
AT1G80230.1	1	157	171	91.81

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold115	Augus-PASA	mRNA	72916	76990	.	+	.	ID=Dca4064.1;Parent=Dca4064
scaffold115	Augus-PASA	exon	72916	73054	.	+	.	ID=Dca4064.1.exon1;Parent=Dca4064.1
scaffold115	Augus-PASA	exon	73204	73289	.	+	.	ID=Dca4064.1.exon2;Parent=Dca4064.1
scaffold115	Augus-PASA	exon	73482	73532	.	+	.	ID=Dca4064.1.exon3;Parent=Dca4064.1
scaffold115	Augus-PASA	exon	76480	76546	.	+	.	ID=Dca4064.1.exon4;Parent=Dca4064.1
scaffold115	Augus-PASA	exon	76673	76752	.	+	.	ID=Dca4064.1.exon5;Parent=Dca4064.1
scaffold115	Augus-PASA	exon	76919	76990	.	+	.	ID=Dca4064.1.exon6;Parent=Dca4064.1