Carnation DB

Dca4070.1

Annotation

5-exons
f-1
sp|B9GWC6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_817069#unknown#0F0P0C
AT1G52630.1 | Symbols: | O-fucosyltransferase family protein | chr1:19606470-19608526 REVERSE LENGTH=439
Repeat List (scaffold115)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4070.1	6	388	389	74.55	383	74	5e-177
Target_name	Start	End	Length	Cov(%)
sp\|B9GWC6_POPTR	42	436	437	90.38

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4070.1	8	389	389	74.29	382	74	7e-178
Target_name	Start	End	Length	Cov(%)
AT1G52630.1	46	439	439	89.74

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold115	Augustus	mRNA	122658	124582	.	+	.	ID=Dca4070.1;Parent=Dca4070
scaffold115	Augustus	exon	122658	122748	.	+	.	ID=Dca4070.1.exon1;Parent=Dca4070.1
scaffold115	Augustus	exon	123077	123147	.	+	.	ID=Dca4070.1.exon2;Parent=Dca4070.1
scaffold115	Augustus	exon	123266	123354	.	+	.	ID=Dca4070.1.exon3;Parent=Dca4070.1
scaffold115	Augustus	exon	123567	123752	.	+	.	ID=Dca4070.1.exon4;Parent=Dca4070.1
scaffold115	Augustus	exon	123850	124582	.	+	.	ID=Dca4070.1.exon5;Parent=Dca4070.1