Dca40859.1
Annotation
- 2-exons
- f-1
- sp|Q8S805_ORYSJ#Putative copia-type polyprotein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0020E23.19#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold4498)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40859.1 |
1 |
1345 |
1355 |
44.57 |
1345 |
43 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q8S805_ORYSJ |
42 |
1398 |
1803 |
75.26 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40859.1 |
346 |
1339 |
1355 |
22.95 |
994 |
30 |
8e-129
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
379 |
1386 |
1401 |
71.94 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4498 |
Augustus |
mRNA |
18557 |
22713 |
. |
- |
. |
ID=Dca40859.1;Parent=Dca40859 |
| scaffold4498 |
Augustus |
exon |
18557 |
19892 |
. |
- |
. |
ID=Dca40859.1.exon1;Parent=Dca40859.1 |
| scaffold4498 |
Augustus |
exon |
19982 |
22713 |
. |
- |
. |
ID=Dca40859.1.exon2;Parent=Dca40859.1 |
