Carnation DB

Dca40877.1

Annotation

5-exons
f-1
sp|B9I3A2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_421621#GO:0003950#1F0P0C
AT1G23550.1 | Symbols: SRO2 | similar to RCD one 2 | chr1:8350912-8352232 FORWARD LENGTH=323
Repeat List (scaffold45)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40877.1	45	312	328	44.51	268	53	6e-75
Target_name	Start	End	Length	Cov(%)
sp\|B9I3A2_POPTR	20	282	282	93.26

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40877.1	45	314	328	33.84	270	40	1e-52
Target_name	Start	End	Length	Cov(%)
AT1G23550.1	45	316	323	84.21

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold45	Augustus	mRNA	93058	95713	.	+	.	ID=Dca40877.1;Parent=Dca40877
scaffold45	Augustus	exon	93058	93518	.	+	.	ID=Dca40877.1.exon1;Parent=Dca40877.1
scaffold45	Augustus	exon	93607	93857	.	+	.	ID=Dca40877.1.exon2;Parent=Dca40877.1
scaffold45	Augustus	exon	93947	94086	.	+	.	ID=Dca40877.1.exon3;Parent=Dca40877.1
scaffold45	Augustus	exon	94216	94314	.	+	.	ID=Dca40877.1.exon4;Parent=Dca40877.1
scaffold45	Augustus	exon	95678	95713	.	+	.	ID=Dca40877.1.exon5;Parent=Dca40877.1