Dca40912.1
Annotation
- 2-exons
- f-1
- sp|Q5R1J2_ORYSJ#Integrase core domain, putative#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os11g18580#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold45)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40912.1 |
1 |
186 |
188 |
54.25 |
186 |
49 |
1e-49
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q5R1J2_ORYSJ |
973 |
1184 |
1184 |
17.9 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40912.1 |
4 |
171 |
188 |
31.38 |
168 |
30 |
6e-14
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1187 |
1382 |
1401 |
13.99 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold45 |
Augustus |
mRNA |
393612 |
394261 |
. |
- |
. |
ID=Dca40912.1;Parent=Dca40912 |
| scaffold45 |
Augustus |
exon |
393612 |
393834 |
. |
- |
. |
ID=Dca40912.1.exon1;Parent=Dca40912.1 |
| scaffold45 |
Augustus |
exon |
393918 |
394261 |
. |
- |
. |
ID=Dca40912.1.exon2;Parent=Dca40912.1 |
