Dca4103.1
Annotation
- 2-exons
- f-1
- sp|Q2R1A9_ORYSJ#Retrotransposon protein, putative, Ty3-gypsy subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os11g39790#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
- Repeat List (scaffold11506)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4103.1 |
2 |
308 |
308 |
69.15 |
307 |
64 |
8e-120
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2R1A9_ORYSJ |
946 |
1280 |
1784 |
18.77 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4103.1 |
2 |
70 |
308 |
10.71 |
69 |
48 |
2e-13
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
641 |
705 |
1539 |
4.22 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold11506 |
Augustus |
mRNA |
1 |
1130 |
. |
- |
. |
ID=Dca4103.1;Parent=Dca4103 |
| scaffold11506 |
Augustus |
exon |
1 |
713 |
. |
- |
. |
ID=Dca4103.1.exon1;Parent=Dca4103.1 |
| scaffold11506 |
Augustus |
exon |
918 |
1130 |
. |
- |
. |
ID=Dca4103.1.exon2;Parent=Dca4103.1 |
