Dca41110.1
Annotation
- 4-exons
- f-1
- sp|Q9ZVF0_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g01550#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold4533)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca41110.1 |
32 |
497 |
533 |
28.33 |
466 |
31 |
2e-59
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZVF0_ARATH |
868 |
1327 |
1449 |
31.74 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca41110.1 |
246 |
412 |
533 |
9.75 |
167 |
31 |
1e-17
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
668 |
838 |
857 |
19.95 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4533 |
Augustus |
mRNA |
4047 |
7318 |
. |
+ |
. |
ID=Dca41110.1;Parent=Dca41110 |
| scaffold4533 |
Augustus |
exon |
4047 |
4137 |
. |
+ |
. |
ID=Dca41110.1.exon1;Parent=Dca41110.1 |
| scaffold4533 |
Augustus |
exon |
5427 |
5898 |
. |
+ |
. |
ID=Dca41110.1.exon2;Parent=Dca41110.1 |
| scaffold4533 |
Augustus |
exon |
6208 |
7133 |
. |
+ |
. |
ID=Dca41110.1.exon3;Parent=Dca41110.1 |
| scaffold4533 |
Augustus |
exon |
7206 |
7318 |
. |
+ |
. |
ID=Dca41110.1.exon4;Parent=Dca41110.1 |
