Carnation DB

Dca41125.1

Annotation

10-exons
f-1
sp|F6HXG7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_09s0002g07520#GO:0003684;GO:0008534;GO:0008270;GO:0006284;GO:0006289#3F2P0C
sp|B9RVA4_RICCO#Formamidopyrimidine-DNA glycosylase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0901410#GO:0003684;GO:0008534;GO:0008270;GO:0006284;GO:0006289#3F2P0C
Repeat List (scaffold4536)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41125.1	1	340	399	61.15	340	70	6e-140
Target_name	Start	End	Length	Cov(%)
sp\|F6HXG7_VITVI	1	350	410	85.36

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41125.1	1	296	399	54.88	296	74	1e-128
Target_name	Start	End	Length	Cov(%)
AT1G52500.2	1	297	390	76.15

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4536	Augustus	mRNA	25062	29392	.	-	.	ID=Dca41125.1;Parent=Dca41125
scaffold4536	Augustus	exon	25062	25460	.	-	.	ID=Dca41125.1.exon1;Parent=Dca41125.1
scaffold4536	Augustus	exon	25707	25741	.	-	.	ID=Dca41125.1.exon2;Parent=Dca41125.1
scaffold4536	Augustus	exon	26188	26290	.	-	.	ID=Dca41125.1.exon3;Parent=Dca41125.1
scaffold4536	Augustus	exon	26529	26606	.	-	.	ID=Dca41125.1.exon4;Parent=Dca41125.1
scaffold4536	Augustus	exon	26738	26788	.	-	.	ID=Dca41125.1.exon5;Parent=Dca41125.1
scaffold4536	Augustus	exon	27374	27499	.	-	.	ID=Dca41125.1.exon6;Parent=Dca41125.1
scaffold4536	Augustus	exon	27580	27648	.	-	.	ID=Dca41125.1.exon7;Parent=Dca41125.1
scaffold4536	Augustus	exon	27772	27829	.	-	.	ID=Dca41125.1.exon8;Parent=Dca41125.1
scaffold4536	Augustus	exon	28326	28377	.	-	.	ID=Dca41125.1.exon9;Parent=Dca41125.1
scaffold4536	Augustus	exon	29164	29392	.	-	.	ID=Dca41125.1.exon10;Parent=Dca41125.1