Carnation DB

Dca41190.1

Annotation

5-exons
f-1
sp|F6GT59_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g06580#GO:0016020;GO:0006886;GO:0016192#0F2P1C
Os01t0707300-01 Similar to Vesicle transport v-SNARE 13 (AtVTI13) (Vesicle transport v-SNARE protein VTI13) (Vesicle soluble NSF attachment protein receptor 13).
Repeat List (scaffold455)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41190.1	1	218	219	77.16	218	78	1e-96
Target_name	Start	End	Length	Cov(%)
sp\|F6GT59_VITVI	1	219	221	99.09

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41190.1	1	218	219	71.23	218	72	2e-85
Target_name	Start	End	Length	Cov(%)
Os01t0707300-01	1	219	222	98.64

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold455	Augus-PASA	mRNA	99463	101510	.	+	.	ID=Dca41190.1;Parent=Dca41190
scaffold455	Augus-PASA	exon	99463	99556	.	+	.	ID=Dca41190.1.exon1;Parent=Dca41190.1
scaffold455	Augus-PASA	exon	100565	100623	.	+	.	ID=Dca41190.1.exon2;Parent=Dca41190.1
scaffold455	Augus-PASA	exon	100721	100906	.	+	.	ID=Dca41190.1.exon3;Parent=Dca41190.1
scaffold455	Augus-PASA	exon	101033	101203	.	+	.	ID=Dca41190.1.exon4;Parent=Dca41190.1
scaffold455	Augus-PASA	exon	101361	101510	.	+	.	ID=Dca41190.1.exon5;Parent=Dca41190.1