Carnation DB

Dca41233.1

Annotation

11-exons
f-1
sp|F6GWQ1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0023g02950#GO:0005634;GO:0003677;GO:0008270;GO:0016570;GO:0006352#2F2P1C
sp|B9T6E1_RICCO#Nuclear receptor binding set domain containing protein 1, nsd, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0172980#GO:0005634;GO:0003677;GO:0004872;GO:0008270;GO:0016570;GO:0006352#3F2P1C
Repeat List (scaffold456)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41233.1	65	610	621	49.75	546	55	6e-165
Target_name	Start	End	Length	Cov(%)
sp\|F6GWQ1_VITVI	60	609	1447	38

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41233.1	68	611	621	41.54	544	47	3e-140
Target_name	Start	End	Length	Cov(%)
AT3G51120.1	61	588	1292	40.86

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold456	Augustus	mRNA	123324	135404	.	-	.	ID=Dca41233.1;Parent=Dca41233
scaffold456	Augustus	exon	123324	123688	.	-	.	ID=Dca41233.1.exon1;Parent=Dca41233.1
scaffold456	Augustus	exon	126836	128413	.	-	.	ID=Dca41233.1.exon2;Parent=Dca41233.1
scaffold456	Augustus	exon	128514	130325	.	-	.	ID=Dca41233.1.exon3;Parent=Dca41233.1
scaffold456	Augustus	exon	130422	130570	.	-	.	ID=Dca41233.1.exon4;Parent=Dca41233.1
scaffold456	Augustus	exon	131188	131270	.	-	.	ID=Dca41233.1.exon5;Parent=Dca41233.1
scaffold456	Augustus	exon	131349	131408	.	-	.	ID=Dca41233.1.exon6;Parent=Dca41233.1
scaffold456	Augustus	exon	131620	131747	.	-	.	ID=Dca41233.1.exon7;Parent=Dca41233.1
scaffold456	Augustus	exon	131841	132750	.	-	.	ID=Dca41233.1.exon8;Parent=Dca41233.1
scaffold456	Augustus	exon	133251	133438	.	-	.	ID=Dca41233.1.exon9;Parent=Dca41233.1
scaffold456	Augustus	exon	134794	134873	.	-	.	ID=Dca41233.1.exon10;Parent=Dca41233.1
scaffold456	Augustus	exon	134989	135404	.	-	.	ID=Dca41233.1.exon11;Parent=Dca41233.1