Dca41286.1
Annotation
- 3-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold4571)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca41286.1 |
164 |
276 |
282 |
23.04 |
113 |
58 |
3e-34
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
781 |
893 |
896 |
12.61 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca41286.1 |
165 |
267 |
282 |
13.82 |
103 |
38 |
1e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1284 |
1384 |
1401 |
7.2 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4571 |
Augustus |
mRNA |
3097 |
5066 |
. |
- |
. |
ID=Dca41286.1;Parent=Dca41286 |
| scaffold4571 |
Augustus |
exon |
3097 |
3455 |
. |
- |
. |
ID=Dca41286.1.exon1;Parent=Dca41286.1 |
| scaffold4571 |
Augustus |
exon |
4367 |
4541 |
. |
- |
. |
ID=Dca41286.1.exon2;Parent=Dca41286.1 |
| scaffold4571 |
Augustus |
exon |
4752 |
5066 |
. |
- |
. |
ID=Dca41286.1.exon3;Parent=Dca41286.1 |
